HL_7AZY_054

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7AZY|1|E|G|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_054 not in the Motif Atlas

Homologous match to HL_8C3A_055

Geometric discrepancy: 0.0928

The information below is about HL_8C3A_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7AZY|1|E|C|2616
7AZY|1|E|U|2617
7AZY|1|E|G|2618
7AZY|1|E|G|2619
7AZY|1|E|G|2620
7AZY|1|E|G|2621
7AZY|1|E|C|2622
7AZY|1|E|G|2623
7AZY|1|E|G|2624

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain W

60S ribosomal protein L29

Chain o

60S ribosomal protein L10