HL_7AZY_056

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_056 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1387

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7AZY|1|E|A|2673
7AZY|1|E|A|2674
7AZY|1|E|C|2675
7AZY|1|E|A|2676
7AZY|1|E|G|2677
7AZY|1|E|A|2678
7AZY|1|E|A|2679
7AZY|1|E|A|2680
7AZY|1|E|U|2681

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain h

60S ribosomal protein L11-B