HL_7B5K_002
3D structure
- PDB id
- 7B5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCUUACAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B5K_002 not in the Motif Atlas
- Homologous match to HL_4YCP_002
- Geometric discrepancy: 0.3134
- The information below is about HL_4YCP_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B5K|1|9|C|31
7B5K|1|9|C|32
7B5K|1|9|U|33
7B5K|1|9|U|34
7B5K|1|9|A|35
7B5K|1|9|C|36
7B5K|1|9|A|37
7B5K|1|9|A|38
7B5K|1|9|G|39
Current chains
- Chain 9
- E-site val tRNA (76-MER)
Nearby chains
- Chain 6
- mRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain g
- 30S ribosomal protein S7
- Chain k
- 30S ribosomal protein S11
- Chain x
- Transfer RNA; tRNA
Coloring options: