HL_7B5K_028

3D structure

PDB id

7B5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGUCACUU

Length

9 nucleotides

Bulged bases

7B5K|1|A|C|885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7B5K|1|A|G|881
7B5K|1|A|G|882
7B5K|1|A|G|883
7B5K|1|A|U|884
7B5K|1|A|C|885
7B5K|1|A|A|892
7B5K|1|A|C|893
7B5K|1|A|U|894
7B5K|1|A|U|895

Current chains

Chain A

23S rRNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain z

Transfer RNA; tRNA