HL_7B7D_001
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUUGAUCCUGC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_001 not in the Motif Atlas
- Homologous match to HL_4V88_186
- Geometric discrepancy: 0.108
- The information below is about HL_4V88_186
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.2
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7B7D|1|2|G|7
7B7D|1|2|U|8
7B7D|1|2|U|9
7B7D|1|2|G|10
7B7D|1|2|A|11
7B7D|1|2|U|12
7B7D|1|2|C|13
7B7D|1|2|C|14
7B7D|1|2|U|15
7B7D|1|2|G|16
7B7D|1|2|C|17
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain R
- 40S ribosomal protein S2
- Chain c
- 40S ribosomal protein S23-A
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