HL_7B7D_017

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCUAACCUUGAGCUUGGCGAAC

Length

22 nucleotides

Bulged bases

7B7D|1|2|C|709, 7B7D|1|2|G|714, 7B7D|1|2|C|726, 7B7D|1|2|G|730, 7B7D|1|2|A|733

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7B7D|1|2|G|703
7B7D|1|2|C|704
7B7D|1|2|U|705
7B7D|1|2|A|706
7B7D|1|2|A|707
7B7D|1|2|C|708
7B7D|1|2|C|709
7B7D|1|2|U|710
7B7D|1|2|U|711
7B7D|1|2|G|712
7B7D|1|2|A|713
7B7D|1|2|G|714
7B7D|1|2|C|726
7B7D|1|2|U|727
7B7D|1|2|U|728
7B7D|1|2|G|729
7B7D|1|2|G|730
7B7D|1|2|C|731
7B7D|1|2|G|732
7B7D|1|2|A|733
7B7D|1|2|A|734
7B7D|1|2|C|735

Current chains

Chain 2

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S4-A

Chain T

40S ribosomal protein S6-A