HL_7B7D_057
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_057 not in the Motif Atlas
- Homologous match to HL_5TBW_019
- Geometric discrepancy: 0.1105
- The information below is about HL_5TBW_019
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7B7D|1|LA|G|844
7B7D|1|LA|G|845
7B7D|1|LA|A|846
7B7D|1|LA|A|847
7B7D|1|LA|A|848
7B7D|1|LA|C|849
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ll
- 60S ribosomal protein L43-A
- Chain X
- 40S ribosomal protein S11-A
- Chain Y
- 40S ribosomal protein S13
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