HL_7B7D_066

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

7B7D|1|LA|A|1270

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7B7D_066 not in the Motif Atlas

Homologous match to HL_5TBW_028

Geometric discrepancy: 0.3125

The information below is about HL_5TBW_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7B7D|1|LA|G|1266
7B7D|1|LA|U|1267
7B7D|1|LA|G|1268
7B7D|1|LA|U|1269
7B7D|1|LA|A|1270
7B7D|1|LA|A|1271
7B7D|1|LA|C|1272
7B7D|1|LA|A|1273
7B7D|1|LA|A|1274
7B7D|1|LA|C|1275

Current chains

Chain LA

25S rRNA

Nearby chains