HL_7B7D_075

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

7B7D|1|LA|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7B7D_075 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.1088

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7B7D|1|LA|G|1680
7B7D|1|LA|U|1681
7B7D|1|LA|U|1682
7B7D|1|LA|A|1683
7B7D|1|LA|U|1684
7B7D|1|LA|C|1685
7B7D|1|LA|U|1686
7B7D|1|LA|U|1687
7B7D|1|LA|U|1688

Current chains

Chain LA

25S rRNA

Nearby chains

Chain Ln

60S ribosomal protein L19-A

Chain Lq

60S ribosomal protein L22-A