HL_7B7D_106
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7B7D|1|LA|G|3116, 7B7D|1|LA|C|3120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_106 not in the Motif Atlas
- Homologous match to HL_8C3A_068
- Geometric discrepancy: 0.0992
- The information below is about HL_8C3A_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
7B7D|1|LA|C|3110
7B7D|1|LA|U|3111
7B7D|1|LA|G|3112
7B7D|1|LA|A|3113
7B7D|1|LA|A|3114
7B7D|1|LA|C|3115
7B7D|1|LA|G|3116
7B7D|1|LA|C|3117
7B7D|1|LA|C|3118
7B7D|1|LA|U|3119
7B7D|1|LA|C|3120
7B7D|1|LA|U|3121
7B7D|1|LA|A|3122
7B7D|1|LA|A|3123
7B7D|1|LA|G|3124
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L9-A
- Chain LQ
- 60S ribosomal protein L16-A
- Chain Li
- Ubiquitin-60S ribosomal protein L40
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