HL_7B7D_110

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7B7D|1|LA|U|3351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7B7D_110 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1202

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7B7D|1|LA|C|3350
7B7D|1|LA|U|3351
7B7D|1|LA|U|3352
7B7D|1|LA|G|3353

Current chains

Chain LA

25S rRNA

Nearby chains

Chain V

40S ribosomal protein S8-A