HL_7B7D_117
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_117 not in the Motif Atlas
- Homologous match to HL_4WT8_216
- Geometric discrepancy: 0.1377
- The information below is about HL_4WT8_216
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7B7D|1|Sm|G|31
7B7D|1|Sm|C|32
7B7D|1|Sm|U|33
7B7D|1|Sm|C|34
7B7D|1|Sm|A|35
7B7D|1|Sm|U|36
7B7D|1|Sm|A|37
7B7D|1|Sm|A|38
7B7D|1|Sm|C|39
Current chains
- Chain Sm
- tRNA
Nearby chains
- Chain 1
- mRNA
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- Ubiquitin-40S ribosomal protein S31
- Chain c
- 40S ribosomal protein S23-A
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