HL_7B7D_122

3D structure

PDB id

7B7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UACAAUGUAAAUACCUUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7B7D|1|2|U|517
7B7D|1|2|A|518
7B7D|1|2|C|519
7B7D|1|2|A|520
7B7D|1|2|A|521
7B7D|1|2|U|522
7B7D|1|2|G|523
7B7D|1|2|U|524
7B7D|1|2|A|525
7B7D|1|2|A|526
7B7D|1|2|A|527
7B7D|1|2|U|528
7B7D|1|2|A|529
7B7D|1|2|C|530
7B7D|1|2|C|531
7B7D|1|2|U|532
7B7D|1|2|U|533
7B7D|1|2|A|534
7B7D|1|2|A|535

Current chains

Chain 2

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S4-A

Chain W

40S ribosomal protein S9-A

Chain d

40S ribosomal protein S24-A