HL_7BGD_012

3D structure

PDB id

7BGD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGUAAGUAACUGUGCACAUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BGD|1|a|G|466
7BGD|1|a|U|467
7BGD|1|a|G|468
7BGD|1|a|U|469
7BGD|1|a|A|470
7BGD|1|a|A|471
7BGD|1|a|G|472
7BGD|1|a|U|473
7BGD|1|a|A|474
7BGD|1|a|A|475
7BGD|1|a|C|476
7BGD|1|a|U|477
7BGD|1|a|G|478
7BGD|1|a|U|479
7BGD|1|a|G|480
7BGD|1|a|C|481
7BGD|1|a|A|482
7BGD|1|a|C|483
7BGD|1|a|A|484
7BGD|1|a|U|485
7BGD|1|a|C|486

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16