3D structure

PDB id
7BL3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle state 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
7BL3|1|A|A|196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7BL3_006 not in the Motif Atlas
Homologous match to HL_4WF9_006
Geometric discrepancy: 0.1707
The information below is about HL_4WF9_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7BL3|1|A|G|194
7BL3|1|A|A|195
7BL3|1|A|A|196
7BL3|1|A|A|197
7BL3|1|A|C|198
7BL3|1|A|A|199
7BL3|1|A|U|200
7BL3|1|A|C|201

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain L
50S ribosomal protein L15
Chain X
50S ribosomal protein L28

Coloring options:


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