3D structure

PDB id
7BL5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUGGGGCGG
Length
9 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL5|1|A|C|2248
7BL5|1|A|U|2249
7BL5|1|A|G|2250
7BL5|1|A|G|2251
7BL5|1|A|G|2252
7BL5|1|A|G|2253
7BL5|1|A|C|2254
7BL5|1|A|G|2255
7BL5|1|A|G|2256

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 8
UPF0307 protein YjgA
Chain 9
GTPase ObgE/CgtA
Chain M
50S ribosomal protein L16
Chain W
50S ribosomal protein L27

Coloring options:

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