HL_7BOD_009

3D structure

PDB id

7BOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7BOD|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOD_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1302

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7BOD|1|A|C|342
7BOD|1|A|U|343
7BOD|1|A|A|344
7BOD|1|A|C|345
7BOD|1|A|G|346
7BOD|1|A|G|347

Current chains

Chain A

16S rRNA (body domain of 30S subunit)

Nearby chains