HL_7BOD_022

3D structure

PDB id

7BOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

G(2MG)G(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

7BOD|1|A|G|1517

QA status

Modified nucleotides: 2MG, MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOD_022 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.0924

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7BOD|1|A|G|1515
7BOD|1|A|2MG|1516
7BOD|1|A|G|1517
7BOD|1|A|MA6|1518
7BOD|1|A|MA6|1519
7BOD|1|A|C|1520

Current chains

Chain A

16S rRNA (body domain of 30S subunit)

Nearby chains