HL_7BOE_018

3D structure

PDB id

7BOE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOE_018 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2554

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7BOE|1|A|C|840
7BOE|1|A|C|841
7BOE|1|A|U|842
7BOE|1|A|U|843
7BOE|1|A|G|844
7BOE|1|A|A|845
7BOE|1|A|G|846

Current chains

Chain A

16S rRNA

Nearby chains

Chain R

30S ribosomal protein S18