HL_7BOF_017

3D structure

PDB id

7BOF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state I (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

7BOF|1|A|A|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOF_017 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2211

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7BOF|1|A|G|786
7BOF|1|A|A|787
7BOF|1|A|U|788
7BOF|1|A|U|789
7BOF|1|A|A|790
7BOF|1|A|G|791
7BOF|1|A|A|792
7BOF|1|A|U|793
7BOF|1|A|A|794
7BOF|1|A|C|795
7BOF|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11