HL_7BOH_012

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7BOH|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOH_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1323

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7BOH|1|A|G|462
7BOH|1|A|U|463
7BOH|1|A|U|464
7BOH|1|A|A|465
7BOH|1|A|A|466
7BOH|1|A|U|467
7BOH|1|A|A|468
7BOH|1|A|C|469
7BOH|1|A|C|470

Current chains

Chain A

RNA (1527-MER)

Nearby chains