HL_7BOI_009

3D structure

PDB id

7BOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7BOI|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOI_009 not in the Motif Atlas

Homologous match to HL_5J7L_009

Geometric discrepancy: 0.2367

The information below is about HL_5J7L_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7BOI|1|A|C|342
7BOI|1|A|U|343
7BOI|1|A|A|344
7BOI|1|A|C|345
7BOI|1|A|G|346
7BOI|1|A|G|347

Current chains

Chain A

16S rRNA

Nearby chains