HL_7BOI_012

3D structure

PDB id

7BOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7BOI|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOI_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1496

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7BOI|1|A|G|462
7BOI|1|A|U|463
7BOI|1|A|U|464
7BOI|1|A|A|465
7BOI|1|A|A|466
7BOI|1|A|U|467
7BOI|1|A|A|468
7BOI|1|A|C|469
7BOI|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains