HL_7BTB_074

3D structure

PDB id

7BTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

CAUUCUG

Length

7 nucleotides

Bulged bases

7BTB|1|6|C|15

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BTB_074 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2342

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7BTB|1|6|C|11
7BTB|1|6|A|12
7BTB|1|6|U|13
7BTB|1|6|U|14
7BTB|1|6|C|15
7BTB|1|6|U|16
7BTB|1|6|G|17

Current chains

Chain 6

ITS2-1 miscRNA

Nearby chains

Chain K

Proteasome-interacting protein CIC1