HL_7BTB_080
3D structure
- PDB id
- 7BTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UGGAUUGUUCACCCA
- Length
- 15 nucleotides
- Bulged bases
- 7BTB|1|1|G|2922, 7BTB|1|1|U|2923, 7BTB|1|1|C|2925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BTB|1|1|U|2916
7BTB|1|1|G|2917
7BTB|1|1|G|2918
7BTB|1|1|A|2919
7BTB|1|1|U|2920
7BTB|1|1|U|2921
7BTB|1|1|G|2922
7BTB|1|1|U|2923
7BTB|1|1|U|2924
7BTB|1|1|C|2925
7BTB|1|1|A|2926
7BTB|1|1|C|2927
7BTB|1|1|C|2928
7BTB|1|1|C|2929
7BTB|1|1|A|2930
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain V
- 60S ribosomal protein L23-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain m
- Nucleolar GTP-binding protein 2
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