HL_7CPJ_002
3D structure
- PDB id
- 7CPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ycbZ-stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUUCGGGAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7CPJ_002 not in the Motif Atlas
- Homologous match to HL_6UFG_007
- Geometric discrepancy: 0.1489
- The information below is about HL_6UFG_007
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
7CPJ|1|9|G|31
7CPJ|1|9|U|32
7CPJ|1|9|U|33
7CPJ|1|9|C|34
7CPJ|1|9|G|35
7CPJ|1|9|G|36
7CPJ|1|9|G|37
7CPJ|1|9|A|38
7CPJ|1|9|C|39
Current chains
- Chain 9
- P/P tRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- 30S ribosomal protein S9
- Chain x
- mRNA
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