HL_7CPV_046

3D structure

PDB id

7CPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse testis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

GGGUCGGGGCCGGCGCCUAGC

Length

21 nucleotides

Bulged bases

7CPV|1|L5|G|3242, 7CPV|1|L5|A|3253

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPV|1|L5|G|2655
7CPV|1|L5|G|2656
7CPV|1|L5|G|2657
7CPV|1|L5|U|2658
7CPV|1|L5|C|2659
7CPV|1|L5|G|2660
7CPV|1|L5|G|2661
7CPV|1|L5|G|3242
7CPV|1|L5|G|3243
7CPV|1|L5|C|3244
7CPV|1|L5|C|3245
7CPV|1|L5|G|3246
7CPV|1|L5|G|3247
7CPV|1|L5|C|3248
7CPV|1|L5|G|3249
7CPV|1|L5|C|3250
7CPV|1|L5|C|3251
7CPV|1|L5|U|3252
7CPV|1|L5|A|3253
7CPV|1|L5|G|3254
7CPV|1|L5|C|3255

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19