HL_7CPV_077
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 7CPV|1|L8|A|82, 7CPV|1|L8|A|84, 7CPV|1|L8|U|85, 7CPV|1|L8|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPV|1|L8|G|68
7CPV|1|L8|U|69
7CPV|1|L8|G|70
7CPV|1|L8|A|71
7CPV|1|L8|A|72
7CPV|1|L8|U|73
7CPV|1|L8|U|74
7CPV|1|L8|G|75
7CPV|1|L8|C|76
7CPV|1|L8|A|77
7CPV|1|L8|G|78
7CPV|1|L8|G|79
7CPV|1|L8|A|80
7CPV|1|L8|C|81
7CPV|1|L8|A|82
7CPV|1|L8|C|83
7CPV|1|L8|A|84
7CPV|1|L8|U|85
7CPV|1|L8|U|86
7CPV|1|L8|G|87
7CPV|1|L8|A|88
7CPV|1|L8|U|89
7CPV|1|L8|C|90
Current chains
- Chain L8
- Mus musculus 5.8S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- Ribosomal protein L39-like
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