HL_7CPV_085

3D structure

PDB id

7CPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse testis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPV|1|S2|G|378
7CPV|1|S2|U|379
7CPV|1|S2|C|380
7CPV|1|S2|G|381
7CPV|1|S2|C|382
7CPV|1|S2|C|383
7CPV|1|S2|G|384
7CPV|1|S2|U|385
7CPV|1|S2|G|386
7CPV|1|S2|C|387
7CPV|1|S2|C|388

Current chains

Chain S2

Mus musculus 18S ribosomal RNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11