HL_7CPV_125
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CGCGGUUCUAUUUUGUUGGUUUUCGGAACUGAG
- Length
- 33 nucleotides
- Bulged bases
- 7CPV|1|S2|C|885, 7CPV|1|S2|U|890, 7CPV|1|S2|G|892, 7CPV|1|S2|G|896, 7CPV|1|S2|U|897
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPV|1|S2|C|878
7CPV|1|S2|G|879
7CPV|1|S2|C|880
7CPV|1|S2|G|881
7CPV|1|S2|G|882
7CPV|1|S2|U|883
7CPV|1|S2|U|884
7CPV|1|S2|C|885
7CPV|1|S2|U|886
7CPV|1|S2|A|887
7CPV|1|S2|U|888
7CPV|1|S2|U|889
7CPV|1|S2|U|890
7CPV|1|S2|U|891
7CPV|1|S2|G|892
7CPV|1|S2|U|893
7CPV|1|S2|U|894
7CPV|1|S2|G|895
7CPV|1|S2|G|896
7CPV|1|S2|U|897
7CPV|1|S2|U|898
7CPV|1|S2|U|899
7CPV|1|S2|U|900
7CPV|1|S2|C|901
7CPV|1|S2|G|902
7CPV|1|S2|G|903
7CPV|1|S2|A|904
7CPV|1|S2|A|905
7CPV|1|S2|C|906
7CPV|1|S2|U|907
7CPV|1|S2|G|908
7CPV|1|S2|A|909
7CPV|1|S2|G|910
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain SH
- 40S ribosomal protein S7
- Chain SL
- 40S ribosomal protein S11
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