HL_7D3J_001

3D structure

PDB id

7D3J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Cas12i1 R-loop complex after target DNA cleavage

Experimental method

X-RAY DIFFRACTION

Resolution

2.45 Å

Loop

Sequence

CAUCG

Length

5 nucleotides

Bulged bases (A, C, G, U)

13A, 14U

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49678.3

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

7D3J|1|B|C|12
7D3J|1|B|A|13
7D3J|1|B|U|14
7D3J|1|B|C|15
7D3J|1|B|G|16

Current chains

Chain B

RNA (43-MER)

Nearby chains

Chain A

12i1-WT