HL_7D6Z_113

3D structure

PDB id

7D6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7D6Z|1|A|U|1065, 7D6Z|1|A|U|1066, 7D6Z|1|A|A|1067, 7D6Z|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D6Z|1|A|C|1064
7D6Z|1|A|U|1065
7D6Z|1|A|U|1066
7D6Z|1|A|A|1067
7D6Z|1|A|G|1068
7D6Z|1|A|A|1069
7D6Z|1|A|A|1070
7D6Z|1|A|G|1071
7D6Z|1|A|C|1072
7D6Z|1|A|A|1073
7D6Z|1|A|G|1074

Current chains

Chain A

23S ribosomal rRNA

Nearby chains

Chain I

50S ribosomal protein L11