HL_7D6Z_121
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- 7D6Z|1|f|C|328
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D6Z_121 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.1285
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7D6Z|1|f|A|320
7D6Z|1|f|A|321
7D6Z|1|f|C|322
7D6Z|1|f|U|323
7D6Z|1|f|G|324
7D6Z|1|f|A|325
7D6Z|1|f|G|326
7D6Z|1|f|A|327
7D6Z|1|f|C|328
7D6Z|1|f|A|329
7D6Z|1|f|C|330
7D6Z|1|f|G|331
7D6Z|1|f|G|332
7D6Z|1|f|U|333
Current chains
- Chain f
- 16S ribosomal rRNA
Nearby chains
- Chain 0
- 30S ribosomal protein S20
- Chain w
- 30S ribosomal protein S16
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