HL_7DUH_035

3D structure

PDB id

7DUH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound

Experimental method

X-RAY DIFFRACTION

Resolution

3.75 Å

Loop

Sequence

CCCGACGAGGG

Length

11 nucleotides

Bulged bases

7DUH|1|A|C|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7DUH|1|A|C|456
7DUH|1|A|C|457
7DUH|1|A|C|458
7DUH|1|A|G|459
7DUH|1|A|A|460
7DUH|1|A|C|461
7DUH|1|A|G|462
7DUH|1|A|A|463
7DUH|1|A|G|474
7DUH|1|A|G|475
7DUH|1|A|G|476

Current chains

Chain A

30S Ribosomal RNA rRNA

Nearby chains

Chain P

30S ribosomal protein S16