HL_7DVQ_002
3D structure
- PDB id
- 7DVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- UUGACAA
- Length
- 7 nucleotides
- Bulged bases
- 7DVQ|1|F|C|40
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7DVQ|1|F|U|36
7DVQ|1|F|U|37
7DVQ|1|F|G|38
7DVQ|1|F|A|39
7DVQ|1|F|C|40
7DVQ|1|F|A|41
7DVQ|1|F|A|42
Current chains
- Chain F
- U6atac snRNA
Nearby chains
- Chain 9
- RING-type E3 ubiquitin-protein ligase PPIL2
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain B
- U5 spliceosomal RNA; U5 snRNA
- Chain G
- pre-mRNA
- Chain R
- SNW domain-containing protein 1
- Chain T
- Pleiotropic regulator 1
Coloring options: