HL_7ELM_002

3D structure

PDB id

7ELM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Csy-AcrIF24

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CGUGUAG

Length

7 nucleotides

Bulged bases

7ELM|1|T|U|54

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ELM_002 not in the Motif Atlas

Geometric match to HL_5LM7_001

Geometric discrepancy: 0.149

The information below is about HL_5LM7_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7ELM|1|T|C|50
7ELM|1|T|G|51
7ELM|1|T|U|52
7ELM|1|T|G|53
7ELM|1|T|U|54
7ELM|1|T|A|55
7ELM|1|T|G|56

Current chains

Chain T

RNA (60-MER)

Nearby chains

Chain S

type I-F CRISPR-associated endoribonuclease Cas6/Csy4