3D structure

PDB id
7EU9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the selenomethionine(SeMet)-derived Cas12i1 R-loop complex before target DNA cleavage
Experimental method
X-RAY DIFFRACTION
Resolution
2.35 Å

Loop

Sequence
CAUCG
Length
5 nucleotides
Bulged bases (A, C, G, U)
13A, 14U
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_49678.3
Basepair signature
cWW-F
Number of instances in this motif group
11

Unit IDs

7EU9|1|B|C|12
7EU9|1|B|A|13
7EU9|1|B|U|14
7EU9|1|B|C|15
7EU9|1|B|G|16

Current chains

Chain B
RNA (43-MER)

Nearby chains

Chain A
Cas12i1 D647A mutant

Coloring options:

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