HL_7EVO_004

3D structure

PDB id

7EVO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of the human 17S U2 snRNP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

7EVO|1|H|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7EVO|1|H|G|158
7EVO|1|H|U|159
7EVO|1|H|A|160
7EVO|1|H|U|161
7EVO|1|H|U|162
7EVO|1|H|G|163
7EVO|1|H|C|164
7EVO|1|H|A|165
7EVO|1|H|G|166
7EVO|1|H|U|167
7EVO|1|H|A|168
7EVO|1|H|C|169
7EVO|1|H|C|170
7EVO|1|H|U|171
7EVO|1|H|C|172

Current chains

Chain H

U2 snRNA

Nearby chains

Chain G

U2 small nuclear ribonucleoprotein B''

Chain e

Small nuclear ribonucleoprotein Sm D3

Chain f

Small nuclear ribonucleoprotein-associated proteins B and B'