HL_7F5S_015

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GGCGGACUGUCCCCAGUGCGCC

Length

22 nucleotides

Bulged bases

7F5S|1|L5|G|1178, 7F5S|1|L5|U|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|G|1170
7F5S|1|L5|G|1171
7F5S|1|L5|C|1172
7F5S|1|L5|G|1173
7F5S|1|L5|G|1174
7F5S|1|L5|A|1175
7F5S|1|L5|C|1176
7F5S|1|L5|U|1177
7F5S|1|L5|G|1178
7F5S|1|L5|U|1179
7F5S|1|L5|C|1180
7F5S|1|L5|C|1181
7F5S|1|L5|C|1182
7F5S|1|L5|C|1183
7F5S|1|L5|A|1184
7F5S|1|L5|G|1185
7F5S|1|L5|U|1186
7F5S|1|L5|G|1187
7F5S|1|L5|C|1188
7F5S|1|L5|G|1189
7F5S|1|L5|C|1190
7F5S|1|L5|C|1191

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10