HL_7F5S_017
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- C(OMG)UCUUG(1MA)(A2M)AC(A2M)CG
- Length
- 14 nucleotides
- Bulged bases
- 7F5S|1|L5|A|1324, 7F5S|1|L5|C|1325
- QA status
- Modified nucleotides: OMG, 1MA, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7F5S_017 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1447
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7F5S|1|L5|C|1315
7F5S|1|L5|OMG|1316
7F5S|1|L5|U|1317
7F5S|1|L5|C|1318
7F5S|1|L5|U|1319
7F5S|1|L5|U|1320
7F5S|1|L5|G|1321
7F5S|1|L5|1MA|1322
7F5S|1|L5|A2M|1323
7F5S|1|L5|A|1324
7F5S|1|L5|C|1325
7F5S|1|L5|A2M|1326
7F5S|1|L5|C|1327
7F5S|1|L5|G|1328
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LC
- 60S ribosomal protein L4
- Chain La
- 60S ribosomal protein L27a
- Chain Le
- 60S ribosomal protein L32
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