HL_7F5S_031

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UAUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAA

Length

70 nucleotides

Bulged bases

7F5S|1|L5|A|1960, 7F5S|1|L5|U|1980, 7F5S|1|L5|G|1981, 7F5S|1|L5|A|1984, 7F5S|1|L5|G|1988, 7F5S|1|L5|U|1997, 7F5S|1|L5|A|2009, 7F5S|1|L5|C|2011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|U|1957
7F5S|1|L5|A|1958
7F5S|1|L5|U|1959
7F5S|1|L5|A|1960
7F5S|1|L5|G|1961
7F5S|1|L5|A|1962
7F5S|1|L5|C|1963
7F5S|1|L5|A|1964
7F5S|1|L5|G|1965
7F5S|1|L5|C|1966
7F5S|1|L5|A|1967
7F5S|1|L5|G|1968
7F5S|1|L5|G|1969
7F5S|1|L5|A|1970
7F5S|1|L5|C|1971
7F5S|1|L5|G|1972
7F5S|1|L5|G|1973
7F5S|1|L5|U|1974
7F5S|1|L5|G|1975
7F5S|1|L5|G|1976
7F5S|1|L5|C|1977
7F5S|1|L5|C|1978
7F5S|1|L5|A|1979
7F5S|1|L5|U|1980
7F5S|1|L5|G|1981
7F5S|1|L5|G|1982
7F5S|1|L5|A|1983
7F5S|1|L5|A|1984
7F5S|1|L5|G|1985
7F5S|1|L5|U|1986
7F5S|1|L5|C|1987
7F5S|1|L5|G|1988
7F5S|1|L5|G|1989
7F5S|1|L5|A|1990
7F5S|1|L5|A|1991
7F5S|1|L5|U|1992
7F5S|1|L5|C|1993
7F5S|1|L5|C|1994
7F5S|1|L5|G|1995
7F5S|1|L5|C|1996
7F5S|1|L5|U|1997
7F5S|1|L5|A|1998
7F5S|1|L5|A|1999
7F5S|1|L5|G|2000
7F5S|1|L5|G|2001
7F5S|1|L5|A|2002
7F5S|1|L5|G|2003
7F5S|1|L5|U|2004
7F5S|1|L5|G|2005
7F5S|1|L5|U|2006
7F5S|1|L5|G|2007
7F5S|1|L5|U|2008
7F5S|1|L5|A|2009
7F5S|1|L5|A|2010
7F5S|1|L5|C|2011
7F5S|1|L5|A|2012
7F5S|1|L5|A|2013
7F5S|1|L5|C|2014
7F5S|1|L5|U|2015
7F5S|1|L5|C|2016
7F5S|1|L5|A|2017
7F5S|1|L5|C|2018
7F5S|1|L5|C|2019
7F5S|1|L5|U|2020
7F5S|1|L5|G|2021
7F5S|1|L5|C|2022
7F5S|1|L5|C|2023
7F5S|1|L5|G|2024
7F5S|1|L5|A|2025
7F5S|1|L5|A|2026

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LS

60S ribosomal protein L18a

Chain Lm

Ubiquitin-60S ribosomal protein L40