3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
GUUCAGAUCC
Length
10 nucleotides
Bulged bases
7F5S|1|L5|U|2530, 7F5S|1|L5|C|2531
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7F5S_038 not in the Motif Atlas
Homologous match to HL_8C3A_035
Geometric discrepancy: 0.0924
The information below is about HL_8C3A_035
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_35087.1
Basepair signature
cWW-tWH-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7F5S|1|L5|G|2523
7F5S|1|L5|U|2524
7F5S|1|L5|U|2525
7F5S|1|L5|C|2526
7F5S|1|L5|A|2527
7F5S|1|L5|G|2528
7F5S|1|L5|A|2529
7F5S|1|L5|U|2530
7F5S|1|L5|C|2531
7F5S|1|L5|C|2532

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19
Chain LX
60S ribosomal protein L23a
Chain Lg
60S ribosomal protein L34

Coloring options:


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