3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
CGCGGCG
Length
7 nucleotides
Bulged bases
7F5S|1|L5|C|3673
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7F5S_051 not in the Motif Atlas
Geometric match to HL_4QK9_001
Geometric discrepancy: 0.2565
The information below is about HL_4QK9_001
Detailed Annotation
GNRA variation
Broad Annotation
GNRA variation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

7F5S|1|L5|C|3668
7F5S|1|L5|G|3669
7F5S|1|L5|C|3670
7F5S|1|L5|G|3671
7F5S|1|L5|G|3672
7F5S|1|L5|C|3673
7F5S|1|L5|G|3674

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LA
60S ribosomal protein L8
Chain LN
60S ribosomal protein L15

Coloring options:


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