HL_7F5S_056

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GGUGUAGAAUAAGUGGGAGGCCCGGGCCGCCGGUGAAAUACCACUAC

Length

47 nucleotides

Bulged bases

7F5S|1|L5|A|3962, 7F5S|1|L5|G|4034, 7F5S|1|L5|G|4035, 7F5S|1|L5|C|4038, 7F5S|1|L5|U|4044, 7F5S|1|L5|A|4047, 7F5S|1|L5|U|4049, 7F5S|1|L5|A|4053, 7F5S|1|L5|C|4054

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|G|3955
7F5S|1|L5|G|3956
7F5S|1|L5|U|3957
7F5S|1|L5|G|3958
7F5S|1|L5|U|3959
7F5S|1|L5|A|3960
7F5S|1|L5|G|3961
7F5S|1|L5|A|3962
7F5S|1|L5|A|3963
7F5S|1|L5|U|3964
7F5S|1|L5|A|3965
7F5S|1|L5|A|3966
7F5S|1|L5|G|3967
7F5S|1|L5|U|3968
7F5S|1|L5|G|3969
7F5S|1|L5|G|3970
7F5S|1|L5|G|3971
7F5S|1|L5|A|3972
7F5S|1|L5|G|3973
7F5S|1|L5|G|3974
7F5S|1|L5|C|3975
7F5S|1|L5|C|3976
7F5S|1|L5|C|3977
7F5S|1|L5|G|4034
7F5S|1|L5|G|4035
7F5S|1|L5|G|4036
7F5S|1|L5|C|4037
7F5S|1|L5|C|4038
7F5S|1|L5|G|4039
7F5S|1|L5|C|4040
7F5S|1|L5|C|4041
7F5S|1|L5|G|4042
7F5S|1|L5|G|4043
7F5S|1|L5|U|4044
7F5S|1|L5|G|4045
7F5S|1|L5|A|4046
7F5S|1|L5|A|4047
7F5S|1|L5|A|4048
7F5S|1|L5|U|4049
7F5S|1|L5|A|4050
7F5S|1|L5|C|4051
7F5S|1|L5|C|4052
7F5S|1|L5|A|4053
7F5S|1|L5|C|4054
7F5S|1|L5|U|4055
7F5S|1|L5|A|4056
7F5S|1|L5|C|4057

Current chains

Chain L5

28S rRNA

Nearby chains