3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
GACAGAAAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7F5S_061 not in the Motif Atlas
Homologous match to HL_8C3A_057
Geometric discrepancy: 0.1123
The information below is about HL_8C3A_057
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_72777.1
Basepair signature
cWW-F-cWH-F-F-F-F
Number of instances in this motif group
6

Unit IDs

7F5S|1|L5|G|4250
7F5S|1|L5|A|4251
7F5S|1|L5|C|4252
7F5S|1|L5|A|4253
7F5S|1|L5|G|4254
7F5S|1|L5|A|4255
7F5S|1|L5|A|4256
7F5S|1|L5|A|4257
7F5S|1|L5|C|4258

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LJ
60S ribosomal protein L11

Coloring options:


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