HL_7F5S_076

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F5S_076 not in the Motif Atlas

Geometric match to HL_8KAL_003

Geometric discrepancy: 0.308

The information below is about HL_8KAL_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7F5S|1|L5|C|5021
7F5S|1|L5|U|5022
7F5S|1|L5|C|5023
7F5S|1|L5|C|5024
7F5S|1|L5|C|5025
7F5S|1|L5|U|5026
7F5S|1|L5|C|5027
7F5S|1|L5|G|5028

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L22