HL_7JQC_015

3D structure

PDB id

7JQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGCGCCGGCCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQC|1|A|G|751
7JQC|1|A|G|752
7JQC|1|A|C|753
7JQC|1|A|G|754
7JQC|1|A|C|755
7JQC|1|A|C|756
7JQC|1|A|G|788
7JQC|1|A|G|789
7JQC|1|A|C|790
7JQC|1|A|C|791
7JQC|1|A|C|792

Current chains

Chain A

rRNA

Nearby chains

Chain H

eS6

Chain M

40S ribosomal protein S4