HL_7JQC_028

3D structure

PDB id

7JQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACCCCGGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQC|1|A|G|1413
7JQC|1|A|A|1414
7JQC|1|A|C|1415
7JQC|1|A|C|1416
7JQC|1|A|C|1417
7JQC|1|A|C|1423
7JQC|1|A|G|1424
7JQC|1|A|G|1425
7JQC|1|A|U|1426
7JQC|1|A|C|1427

Current chains

Chain A

rRNA

Nearby chains

Chain R

Uncharacterized protein

Chain U

Uncharacterized protein