HL_7JQC_040
3D structure
- PDB id
- 7JQC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGACAGGAUUGACAGAUUGAUAGCUCUUUCUCGAUUCC
- Length
- 38 nucleotides
- Bulged bases
- 7JQC|1|A|A|1284, 7JQC|1|A|G|1285
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQC|1|A|G|1280
7JQC|1|A|G|1281
7JQC|1|A|A|1282
7JQC|1|A|C|1283
7JQC|1|A|A|1284
7JQC|1|A|G|1285
7JQC|1|A|G|1286
7JQC|1|A|A|1287
7JQC|1|A|U|1288
7JQC|1|A|U|1289
7JQC|1|A|G|1290
7JQC|1|A|A|1291
7JQC|1|A|C|1292
7JQC|1|A|A|1293
7JQC|1|A|G|1294
7JQC|1|A|A|1295
7JQC|1|A|U|1296
7JQC|1|A|U|1297
7JQC|1|A|G|1298
7JQC|1|A|A|1299
7JQC|1|A|U|1300
7JQC|1|A|A|1301
7JQC|1|A|G|1302
7JQC|1|A|C|1303
7JQC|1|A|U|1304
7JQC|1|A|C|1305
7JQC|1|A|U|1306
7JQC|1|A|U|1307
7JQC|1|A|U|1308
7JQC|1|A|C|1309
7JQC|1|A|U|1310
7JQC|1|A|C|1311
7JQC|1|A|G|1312
7JQC|1|A|A|1313
7JQC|1|A|U|1314
7JQC|1|A|U|1315
7JQC|1|A|C|1316
7JQC|1|A|C|1317
Current chains
- Chain A
- rRNA
Nearby chains
- Chain L
- S10_plectin domain-containing protein
- Chain N
- eS12
- Chain Q
- uS19
- Chain g
- eS31
Coloring options: