HL_7JQL_157

3D structure

PDB id

7JQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

7JQL|1|2A|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7JQL_157 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.2434

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7JQL|1|2A|C|2143
7JQL|1|2A|U|2144
7JQL|1|2A|C|2145
7JQL|1|2A|C|2146
7JQL|1|2A|G|2147
7JQL|1|2A|G|2148

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2k

30S ribosomal protein S11